Package index
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dia-packagedia - dia: Atlantic salmon Dam Impact Analysis (DIA) for R
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downstream_brownsmills - Downstream data for Browns Mills
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downstream_frankfort - Downstream data for Frankfort
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downstream_greatworks - Downstream data for Great Works
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downstream_howland - Downstream data for Howland
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downstream_lowell - Downstream data for Lowell
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downstream_mattaceunk - Downstream data for Mattaceunk
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downstream_medway - Downstream data for Medway
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downstream_milford - Downstream data for Milford
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downstream_milford_old - Downstream data for Milford (old)
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downstream_milo - Downstream data for Milo
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downstream_moosehead - Downstream data for Moosehead
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downstream_orono - Downstream data for Orono
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downstream_orono_old - Downstream data for Orono
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downstream_sebec - Downstream data for Sebec
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downstream_stillwater - Downstream data for Stillwater
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downstream_stillwater_old - Downstream data for Stillwater (old)
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downstream_veazie - Downstream data for Veazie
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downstream_westenfield - Downstream data for West Enfield
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get_dam_passage() - Get dam-specific survival rates
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in_river_m - In river mortality
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inefficiency_matrix - Inefficiency matrix
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life_stage_survival - Life-stage survival rates
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make_egg_to_smolt_survival() - Simulate egg-to-smolt survival
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make_eggs_per_female() - Simulate eggs per female
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make_inriver_s() - Create natural in-river smolt survival by reach
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make_marine_s() - Simulate marine survival
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n_dams - Number of dams by natal production unit (PU) and migration route
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production_units - Production unit table
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river_sections - River sections
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run_dia() - Run the Dam Impact Analysis
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run_dia_shiny() - Run the DIA model interactively with shiny
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run_downstream_passage() - Run downstream passage routine
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run_inefficiency() - Run adult passage inefficiency
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run_one_gen() - Run the Dam Impact Analysis for One Generation
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run_straying() - Run adult straying routine
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run_upstream_passage() - Run upstream migration routine
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smolt_stocking() - Smolt stocking by production unit
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stillwater_use - Stillwater Use
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stillwater_use_old - Stillwater Use (old)
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stocking_default - Default stocking proportions by production unit
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straying_locations - Straying locations
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straying_matrix - Straying matrix
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upstream_inefficiency - Upstream inefficiency of adult migrants